SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr11_P32358 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr11_P32358
Domain Number 1 Region: 3-63
Classification Level Classification E-value
Superfamily POZ domain 4.71e-19
Family BTB/POZ domain 0.00075
Further Details:      
 
Domain Number 2 Region: 130-184
Classification Level Classification E-value
Superfamily Skp1 dimerisation domain-like 1.96e-18
Family Skp1 dimerisation domain-like 0.00026
Further Details:      
 
Weak hits

Sequence:  ITC1587_Bchr11_P32358
Domain Number - Region: 77-99
Classification Level Classification E-value
Superfamily Skp1 dimerisation domain-like 0.0209
Family Skp1 dimerisation domain-like 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr11_P32358
Sequence length 186
Comment skp1-like protein
Sequence
MARTIKLRSSDGEVFEVEEAVAMESQTIKHVIEDDCADGGITLYNVTSDILVKVIEYCKK
HVDAAVGSFIKALGVVDKDLESWDAEFVNVDLATLVDISNPSGGQTTVTGISLLHWNSDH
GSSASPSYPAANYLNIEGLLDLTTQAIADNIKGKKPQEIREIFNIKNEFTPEDEERVREE
NSWAFE
Download sequence
Identical sequences ITC1587_Bchr11_P32358

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]