SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr9_P25311 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr9_P25311
Domain Number 1 Region: 420-840
Classification Level Classification E-value
Superfamily L domain-like 1.56e-43
Family Ngr ectodomain-like 0.088
Further Details:      
 
Domain Number 2 Region: 172-408
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.02e-42
Family Extended AAA-ATPase domain 0.053
Further Details:      
 
Domain Number 3 Region: 775-986
Classification Level Classification E-value
Superfamily L domain-like 4.65e-16
Family Ngr ectodomain-like 0.078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr9_P25311
Sequence length 998
Comment disease resistance rpp13-like protein 1-like
Sequence
MKTAGVVMMVGEWFARYVAGKVRDNMTDEAFSSCADDRNVLGDVRAMLKRVEERLPGVHA
VIHAAEGRPIRDTSLALWLAELKDAAYEADDMLDEFELKELRSRHLHDSSSKVTALASSA
LRFLKNLFVTDDELRRLGKLVGDLDDICLDIDRKKAELDEYNGKDDSATRETSSFLHDEV
IGRDEERNKILDILLSSAHDPDFGDKRAGSSSHPSLGVLPIVGMRGVGKTTLAQLVYNDQ
LVADHFELRRWVYVSDDFNLRKIVKELVYDMAFDPLFDDICSGEIQAKLQDATRNVRFFF
VLDDVWDETGSKWKQLRDALASGARGSTILVTTQRPLVAETMRTMEPIKLEVLGQDDFWR
LFERCAFGDKVLDPDLARKLELIGREISGKLHGLPLAGKAMGSLLRRRYFFLPTLNNKHV
MHDLMRDLAVYVSWDECFVVDDEPAEIPPTVRHLALRTTKLDAVRGVCKFRKLRTINLLN
EYDSEDFYHVLEDMLENLKSLRVSDLSNIRMGKKKKLPDAICDLPHLRFLDLSCTKTRHL
PKSFSRICHLQVLNLNSCRFKKMAEGMNRLIKLRHLYADAETISLIDGVGKLTELQELAE
FRVARKRGHQIGELQELRNLRRRLTIQNLDNVETKEEEALEAKLKDKSHLDSLWLNRKPD
IHSPGDREKEILEGLEPHCNLKELRIQHYGGTTSPDWLVRNQHLTNLESVYLNNCARCES
LPPLGQLPFLKLLHLMSMPVKRIGAEFYGDAEQAFPSLETLKFESLKEWDECALPGCLQI
LSSLNQLELYHYAHRTEICLSNLSELRELHLYHCPELSLHGGLRSLANMRHMETEGCPKL
YETSQPGQRYGERELRSLCHLQTDENLIDNVWFTLGRISSLRNLALHRCGDLVSFTVEQE
EWFQQQTSLEHLQFLNCPNLQALPTSLVTVSSIKKLSIGNCPKISSLPESGVPMSVKEVR
IWGCPSLSDRCRKDRGPDWPKIDHIPRVCIDDEIIQMM
Download sequence
Identical sequences ITC1587_Bchr9_P25311

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]