SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr3_P05650 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr3_P05650
Domain Number 1 Region: 118-277
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.96e-38
Family B3 DNA binding domain 0.0045
Further Details:      
 
Domain Number 2 Region: 1045-1106
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000053
Family PB1 domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr3_P05650
Sequence length 1161
Comment auxin response factor 7a
Sequence
MKAAAHGAAAPNPCEGERKTINPELWYACAGPLVTVPPVGSLVVYFPQGHSEQVAASMQT
DIDAHIPNYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVNSYDKEALQASELALKQ
TRPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNLWTF
RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFISQKIKILVKAYVFLIHYLMCRDQKQ
QLLLGIRRANRQPTNISSSVLSTDSMHIGILAAAAHAAANHSPFTIFYNPRASPSEFVIP
FAKYQKAVYSNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKSSQWRNLQVGW
DESAAGERRNRVSIWEIEPVVAPFFICPPPFFRKRPRQPGMPVDVVDDESSEMENLFKRA
MPWLGEEICIKDSQTQNTIMPGLSLVQWMNMQQNPSLANQTLQTEYLRSLTGPVMQNLGP
TDISRQLGLQAQMLQQNNIQFNTGRLPQQGQQVDEHAKVSVPLNQVSAVSRAPQQMQDPS
MQQKQQLVNQALPVNQTQNNIIQSQALVQTQVQPQQQQQQPPPMIQNNQLLQSSIQQNQQ
QHPQQLLLQHQQQHQQQQHQQQPQQQFQQQYQQAQSRMPVKLPGQVNQQLSDQQIQLQLL
QKLQQQQQQQQSLFSQPRTQQPQLPQVQEYQRTLPDVPQHLSNSHSLLQQSVIPQQCAKP
TSQSVRLPQPLQNQSQQKPQQPQVLISDLPGAFLPATPATIITASGNPLLAAGGAQSGVT
DDIPSCSTSPSANNGTILPHAILNRNEHRNPMSTEKTSKSVITMLGPNSFEAAAANPGIP
KELPKVVQNVKPSIPISKMQNQGIVAPQTYVSNTAQIDYLDTISSATSVCLSQTDGALNQ
NFPLSSFNQPSLLRDAPPDGDIPGTDPRNNVLFGVNIEGSMGIPLATDTLLVNNIDSGKY
QNHIPGDLVANYNTSKDAQQELSSSMVSQSFGVPDMAFNSIDSTINDSGLLNRNSFAPAP
PPPLQRMRTYTKVYKRGAVGRSIDIARYSGYDELKHDLARMFSIEGQLEDRQRIGWKLVY
VDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDVDLGNNNLPNQACSSSDGGNV
WRGHCDQNSGNPSAGSYDHFE
Download sequence
Identical sequences ITC1587_Bchr3_P05650

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]