SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr3_P07228 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr3_P07228
Domain Number 1 Region: 23-125
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.16e-30
Family B3 DNA binding domain 0.0000321
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr3_P07228
Sequence length 659
Comment protein trichome birefringence-like 9
Sequence
MLLRHRYYHHLDHSEREEAPHEREHMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDGGSA
ERGLLLSFEDESGRVWWFRYSYWTSSQSYVLTKGWSRFVKEKKLDAGDVVLFERPRFGGQ
DHFYIGCRRQTPPPAHSMTVPDGPEPLSPVYHAAACSYPASNTARQDCLLHDGKMWHTFQ
HHGITNTRTRNSLVASMYRRAEDRSNAERDEAIETLRRKFRLRAGAGATAYDLSLMVLAR
KCFQLSAIGWLMVDPVHASSTCLLCLMNLMVRMLTGGPSSPLPNGIVDLTCEGTGHWALG
TGGGGQVERAASEKRRGEEIPGFPGMRSLRPFSFSLQRFHCRRPVGSDGWDVCHDSHPDT
ACDYTFGRWVWDEARPLDAYTEDCPFLDAGFQCRRNGRNDSSYLYWRWQPHGCDLPRFNA
SEMLERSRNGKIIFAGDSIGRNQWESFLCMLAKAVQNKSSIYEKYGNPITKHKGFLSMVF
HDHNLTVEYYRAPFLAAVGRPPRASPDHVRAAIHLDALHWQCKHWVDADVLVLNAGHWWN
DKKTIDVNGTWDNGGSCTAFTVPEKDPAALGPEPWNNRVIADTVEGMKSGGRKVQLLNIT
YLTEFRKDAHPSAHREPGTPADAPEDCSHWCLPGVPDTWNQLLYAYLLMMEYDTRKNNV
Download sequence
Identical sequences ITC1587_Bchr3_P07228

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]