SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr3_P07606 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr3_P07606
Domain Number 1 Region: 184-328
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.79e-48
Family B3 DNA binding domain 0.0052
Further Details:      
 
Domain Number 2 Region: 842-921
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000412
Family PB1 domain 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr3_P07606
Sequence length 980
Comment auxin response factor 6-like
Sequence
MEKKKKKKQKKKQQQKCSEGGTSSEIEHHKHFYELKVSSLVGTEDEALIIRSGQSATGSW
FCIIQFLMSYDYVLHQLFDLEVCINNTEEQRCLNSELWHACAGPLVSLPPVGSRVVYFPQ
GHSEQVAASTNKEIDSLPSYRSLPPQLVCQLHNVTMHADVESDEVYAQMTLQPLNPEEQK
EPYLPTELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELI
AMDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNDNNQLLLGIRRA
NRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVY
HTRISVGMRFRMLFETEESSVRRYMGTITGIGDLDPVHWPNSHWRSVKVGWDESTAGERQ
PRVSLWEIEPLTTFPMYPSPFPFRLKRPWPPGLPSLHGGKHDDFSLSSPVTWFRNDGNPG
LQSLNFQSAGVTPWTQPRFDTTILGLPPDMYLTMAADGIQETRTMDPTKQVSSAMLQFQQ
IQNTASMYSPMPPSQLLHHGQSQLPQAFLQNIQLNQVQSQSQSEFFQHQLQQVYPFGKQN
QQQILQQQQALQHQETQQQKFLSDHQQVPSEASVFSQPISEPQSQSATMQNISLISQSRS
FSDSNTNCVSTSDASPLHNILSQFSPGEASHLLSWPRTNQLVTSGPRPSKQVAVDSILPS
GAQCMIPRVEQLGVSEPNISQRSVMLSPFPGRECAVNQGGNMDARNQLLFGVNIDSSSLL
MQNGMTSLCNVGRESDSTGMHYDASNFVGSSVHDFALSQALTGSSGLEETGFLQSSQNAD
QLNQKDGTFVKVSKSGSFGRSLDITRFSSYNELRGELGRMFGLEGQLEDPLRSGWQLVFV
DRENDILLVGDDPWQEFVNNVWCIKILSPQEVQQMGKQDVNFLNSGPIKMLPNNGCDNYI
SRQDSRNLSTRVASMGSLEH
Download sequence
Identical sequences ITC1587_Bchr3_P07606

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]