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Domain assignment for ITC1587_Bchr4_P10337 from Musa balbisiana

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ITC1587_Bchr4_P10337
Domain Number 1 Region: 624-731
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.53e-28
Family B3 DNA binding domain 0.0014
Further Details:      
 
Weak hits

Sequence:  ITC1587_Bchr4_P10337
Domain Number - Region: 1125-1196
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000153
Family PB1 domain 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr4_P10337
Sequence length 1269
Comment auxin response factor 18-like
Sequence
MRKMRNIISACSSLINQAQKFANYMIMIMHCVIPNVPNKPQTIINQSSQNTVRIGAIINT
LIIKPFPIRPIVQVGKVQKRGYVDLQEASTGESVPCSYGATLPKDLCCSLPSSWAMADPS
TFLIRGESYLHDHLKIKANGTLMQMVAADWLKSDKREDDLGGRPGGIVQKYSAHGGSEFF
FIVHIQVPGSTTYSLALYYMMDSPLESVPLLERFIKGDDAYRNSRFKLIPYISKGSWIVK
QSVGKKACLVGQALDINYFCGSNYIEDLLTQLIVDYPWAYLGVDIGSSTVARGVVSLVLG
YLTNLVIEMAFLIQGNTEEELPEFLLGTCRLNHLDCSKAVPSNPCFMCIVVTMIRATRDK
IMSPMPSAVDRAWWWHANEQAAAPGAAHAKRRRSRGSLCKERKNSEFELPKTAESLSDRR
CGLWMTYSNSIAIRLECDEENNAESLDGFWVFDSSSRLLPKLKQVSWRREGVVFVGGDSD
FRLLGYSEGKRSRKGWEFFESIHRLAKSKSMKESSMKQSDKCLDSQLWHACAGGMVQMPA
VNSKVYYFPQGHTEHAQGLVDFGTSQRIPPLIFCCVTAVKFMADLETDEVFAKISLVPLR
PNEPDFGEDDGLGLSINGVDVQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYS
ADPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTENG
DLCVGIRRAKRGGIGGGPDIPSGWNPPGGNCASSYGGFSVFLREEENKLMRGNGNGGGAG
GPMRISGRVRADSVIEAATLAANGQPFEVVYYPRASTPEFCVKAASVKAAMRIQWCPGMR
FKMAFETEDSSRISWFMGTISSVQIADPVRWPNSPWRLLQVTWDEPDLLQNVNRVNPWLV
ELVSNMPAIHLAPFSPPRKKLRIPQHPDFPLEGQLSTPMFPGNPLGHCTSPLFCFPDSTP
AGIQGARHSQFGISLSDLHHNKLQSGLFHAGFHRLNYTSSLSRISAGVAVDSPAIDKNIS
CLLTIGNTSQSIKNPCNAKPQQLMLFGKPILTEEQISLSNSGDMVSPGATGYSSPDGNLE
KTTKFPEASGSATNKNVAVDNSSCNRFEWYGDHHSSDLGLETGHCKVFMESDDVGRTLDL
SVFGSYEELYRRLADMFGIEKSEMMSHVIYKDAAGAVKLTGDEPFSDFMKTARRLTILTD
SGSDNIGRKCKLSDVLFCIVDNMEVINYLSIHLYLVWLFIEIDATRIVQCKLTVLQLIHK
AVGGCMDFV
Download sequence
Identical sequences ITC1587_Bchr4_P10337

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