SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr4_P11389 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr4_P11389
Domain Number 1 Region: 64-155
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.09e-28
Family B3 DNA binding domain 0.0000275
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr4_P11389
Sequence length 317
Comment b3 domain-containing transcription factor nga1-like
Sequence
MEFKLGRSDKLRMSEQEQEQLEVPEHPPFVPSCPSPSSSSTGFGWHDGSSGGGSGPVGSF
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDTLADERGRLLCFEDRTGKPWHFRY
SYWNSSQSYVITRGWSRFVKEKGLDAGDIVSFCRGVGEAGRHRLYIDSQRRPPSRDPPLI
PLPELSYTRLFALPVASLGTSGGQLMYYRWPAASPPQTEVRQVGSGRVPMVLGSVPLVRD
QAAVKRVRLFGVNLNCPESRDDASHHHSDTLSVSLPQLHPRTAFPLLKPPHASGDTPPDS
SSSSICKGKNTPLNLYL
Download sequence
Identical sequences ITC1587_Bchr4_P11389

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]