SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr5_P12002 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr5_P12002
Domain Number 1 Region: 106-215
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.31e-28
Family B3 DNA binding domain 0.0014
Further Details:      
 
Weak hits

Sequence:  ITC1587_Bchr5_P12002
Domain Number - Region: 614-686
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0706
Family PB1 domain 0.081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr5_P12002
Sequence length 748
Comment auxin response factor 18-like
Sequence
MKQINKCLDSQLWHACAGGMVQMPAVNSKVYYFPQGHAEHAQGSVDFGTSQRIPPLILST
VTAVKFLAEPETDEVFAKIRMVPLMADELECGQDDALGLVIDGSNTQEKLASFAKTLTQS
DANNGGGFSVPRYCAETIFPRLDYTVDPPVQTVLVKDVHGEIWKFRHIYRGTPRRHLLTT
GWSTFVNQKKLVAGDSIVFLRTENGDLCMGIRRAKRGGIGGGPEVPSGWILPNGNCMTSY
GNFSVFSRGEECRLMRENGNGGSLRTSRGMRIRGRVKADSVIEAATLAARGQPFEVVYYP
RVSTPEFCVKAASVKAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQIADPVQWPN
SPWRLLQVTWDEPEFLQNVKCVNPWLVELVSNMPTIHLAPFSPPKKKICTSQYPDFCLEG
QPPLPMFLRDPLGHGTSPLCCFPYSTPAGIQGARHAHFGVSLSDFHLNKLQFGLFHAGVH
RLDQTTPPSRITTGLIIDNPAIRNNISCLLTIGNASHSTEKLCNDKPPQLVLFGKTILTE
DQISLSNSGDMVFPGATGNSSADGNLEKTTNMLDVSGSAMNQNIVVDSSSCELFKWDRHR
YHNISQLGLETGHCKIFMESVDVGRTLDLSMFESYEELYTKLADMFGIGKSEIISHVIYN
DAAGAVKHTGDEPYSEFMKTARRLTISTDSGSDDIGRCTDCIILKSIYFELRISDRVCSL
SCQRQNVSHLIRLTDSILTVGNSGSITA
Download sequence
Identical sequences ITC1587_Bchr5_P12002

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]