SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr5_P14503 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr5_P14503
Domain Number 1 Region: 60-204
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.01e-49
Family B3 DNA binding domain 0.0048
Further Details:      
 
Domain Number 2 Region: 665-747
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000203
Family PB1 domain 0.043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr5_P14503
Sequence length 806
Comment auxin response factor 6-like
Sequence
MVAASTNKEIDSLPSYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLSLLEQKDPYL
PAELGMPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDL
HGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQ
TVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRV
SVGMRFRMLFETEESSVRRYMGTITGISDIDPVHWPNSHWRSVKVGWDESTAGQRQPRVS
LWEIEPLTTFPMYPTSFPFRLKRPWPTGLPSLHGGKDDGISLNLPQMLFQNGGNTGFQSL
NFQDISVTPWMRPRLDNPVLSLQPDMYQTMAVAGQKMRIVDTTKNVSPGMLQFQQTQNIP
SRASPIVPSQVLQHGHSQTPQTFLQNLQVNQVQDQSRSEFLQHQLQHGCSFGEQQQNISS
FSQPQNFPDSNGNTVSTASASPLHNILHQLSPEEASNLLSWPRGNQIVTSSSTSSKRMAI
ASMIPSEVQCMMPQVEQLGASQPAISQHSVILPPFPGRQYVVDQDGNMDGQNHLLFGVNI
DSSSLLVQNGMSNLGHLSNETDSMNMHYAASNLVGSSGNDFGLNQAFTVSNGLEQPGLLQ
APGNMDSLNQSSGTFVKVYKSGSCGRSLDITKFSSYHELRSELGRLFGLEGQLEDPLRSG
WQLVFVDRENDILLVGDDPWQEFVNNVWCIKILMRQEVQQMGKPSVDFLNTAHGKRLPSN
SCDEYIARQDSRSLSTVTASVGTLEY
Download sequence
Identical sequences ITC1587_Bchr5_P14503

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]