SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_Bchr6_P15445 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_Bchr6_P15445
Domain Number 1 Region: 113-252
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.31e-42
Family B3 DNA binding domain 0.0036
Further Details:      
 
Domain Number 2 Region: 531-612
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000000353
Family PB1 domain 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ITC1587_Bchr6_P15445
Sequence length 653
Comment auxin response factor 1-like
Sequence
MGPPNSSVGLGSSGDGLYKELWHACAGPLVTVPCQGERVYYFPQGHMEQLEAPSDQENDQ
KMPLFNLPSKILCKVIHVDLHAEPDTDEVYAQITLLPEINQQGEVTTPDPPLPEAERCTV
HSFCKILTASDTSTHGGFSVLRRHADECLPPLDMSQNPPSQELVAKDLHGNEWHFRHIFR
GHPKRHLLTTGWSVFVNAKQLVAGDAFIFLRGENGELRVGVRRLMKQQNNMPSSVISSHS
MHVGVLATAAHAFSTGTRFSVFYKPRTNRSEFVISVNKYLEAKNKKISMGMRFKMRFEGD
EAPEKRFSGTIIGMGDTKTSIWADSEWRSLKVRWDEHSSIMRPDKVSPWELVPLVAATHP
TSQPVQRSKRARPPGSPELWKSPEETTQNYSVSETQSSSFSAASKFDTIGFSAKTGTSTV
TNSPIYWPIRTSAQTKSFLTSINEGPNETKKEATMGCRLFGIQLIESAATEEISPVVTIS
SIAEDQPLTSLIVDSDRQSQPSNVNRSDTPAISSEVDKSCLKSPQETYSRQTRSCTKVHM
QGFAVGRAVDLTRLNGYDELLHKLEEMFSIEGELTGAVNKWVIVYTDDEDDIMLVGDDPW
NEFCSIVRKIHIYTCEEAKRLSPKIKLPVIRGDINFRVKKASSGADDYKNHHQ
Download sequence
Identical sequences ITC1587_Bchr6_P15445

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]