SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ITC1587_BchrUn_random_P35103 from Musa balbisiana

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ITC1587_BchrUn_random_P35103
Domain Number 1 Region: 33-130
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.83e-27
Family B3 DNA binding domain 0.00004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ITC1587_BchrUn_random_P35103
Sequence length 276
Comment rav-like b3 domain dna binding protein
Sequence
MDGFGVETPSSSSFLWIPSVAELVRRAPARIRDREHMFDKVVTPSDVGKLNRLVIPKQHA
ERFFPLEPAFAGKGLVLFFEDGAGKQWCFRYSYWSSSQSYVITKGWCRFVKEKQLDAGDT
VSFFRARSGEADQRRRLFIDLQRRRHRTRPVGHQGVLIASTAPPLRGSWLPHFYYGSVVP
PRHVGVQAAAGRADMGSMPAVLDSVPVVLAAAEPKRIRLFGVNLECPETEDRKNSPLLPP
CQSRTESDESTDISTERRQTSMHHHFGCSDREEGRR
Download sequence
Identical sequences ITC1587_BchrUn_random_P35103

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]