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Domain assignment for gi|336235959|ref|YP_004588575.1| from Geobacillus thermoglucosidasius C56-YS93

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|336235959|ref|YP_004588575.1|
Domain Number 1 Region: 256-555
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 1.44e-91
Family DNA repair protein MutS, domain III 0.00000116
Further Details:      
 
Domain Number 2 Region: 558-790
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.86e-65
Family ABC transporter ATPase domain-like 0.000000461
Further Details:      
 
Domain Number 3 Region: 2-112
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 6.8e-44
Family DNA repair protein MutS, domain I 0.0000179
Further Details:      
 
Domain Number 4 Region: 114-269
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 1.12e-31
Family DNA repair protein MutS, domain II 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|336235959|ref|YP_004588575.1|
Sequence length 864
Comment DNA mismatch repair protein mutS [Geobacillus thermoglucosidasius C56-YS93]
Sequence
MAKYTPMIQQYLDIKAQYPDAFLFFRLGDFYEMFFDDAIKAAQELEITLTSRDGGGDERV
PMCGVPYHSAQGYIEQLISKGYKVAICEQVEDPKTAKGVVRREVVQLITPGTVMEGRGLL
EKENNYLATVTLFADGTYGFAYTDLSTGENRITILASFEDVMNELYAIGTKEIVLASDFP
SDEQQLLKERYGVTISYEDGTEMPEGFATIAGGLAQNKLQITFARLLHYIIRTQKRRLDH
MQPVQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLLKQWLDR
PLLDRGQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARDLIQLKK
SLQQIPALKDIVAKLADNQAQQLADKLDPCSELVDLLERSIQENPPLSVKEGNIIKDGYN
ETLDRFRDASRNGKSWIAQLESKERELTGIKSLKIGYNRVFGYYIEVTKPNLHLLPKGRY
ERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFVDIRERVKQYIPRLQSLAKAI
SELDVLQSFATVSEERHYVKPQFSEHRELVIQAGRHPVVEKVLGTQTYVPNDCYMNKERE
LLLITGPNMSGKSTYMRQIALTAIMAQIGCFVPADKAVLPIFDQVFTRIGAADDLVSGQS
TFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALAQAIIEYIHDHIGAKTLFSTH
YHELTDLEQSLPKLKNVHVSAVEENGKVVFLHKIEEGPADQSYGIHVAELAGLPSSLIRR
AEEILAELEQQEEQRKEEQEEPGGKNEAVFEQLSMFAEEKPSKEETRLSKKEKKALETLK
SVNLLEMTPLEALNKLYEIQKLLK
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Identical sequences gi|336235959|ref|YP_004588575.1| WP_013877186.1.15103

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