SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMPUP00000001816 from Mustela putorius furo 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMPUP00000001816
Domain Number 1 Region: 170-368
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 2.35e-57
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0037
Further Details:      
 
Domain Number 2 Region: 3-169
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 1.16e-45
Family Nicotinic receptor ligand binding domain-like 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMPUP00000001816   Gene: ENSMPUG00000001834   Transcript: ENSMPUT00000001852
Sequence length 371
Comment pep:known_by_projection scaffold:MusPutFur1.0:GL897016.1:3059907:3135869:1 gene:ENSMPUG00000001834 transcript:ENSMPUT00000001852 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VTKMTLDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHE
VTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEW
QDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIP
SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC
LLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKQGRLKDDEVRESRFSFTAYGMGPCLQ
AKDGVTPKGPNHPVQVMPKSPDEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKI
LRHEDIHQQQD
Download sequence
Identical sequences M3XRW6
ENSMPUP00000001816 ENSMPUP00000001816

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]