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Domain assignment for OBART01G05230.1 from Oryza barthii 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  OBART01G05230.1
Domain Number 1 Region: 928-1156
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.1e-45
Family ABC transporter ATPase domain-like 0.00000797
Further Details:      
 
Domain Number 2 Region: 690-911
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 3.92e-39
Family DNA repair protein MutS, domain III 0.0013
Further Details:      
 
Domain Number 3 Region: 392-513
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 3.27e-29
Family DNA repair protein MutS, domain I 0.001
Further Details:      
 
Domain Number 4 Region: 539-702
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 0.00000106
Family DNA repair protein MutS, domain II 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OBART01G05230.1
Sequence length 1221
Comment pep:novel chromosome:ABRL00000000:1:3610142:3619769:-1 gene:OBART01G05230 transcript:OBART01G05230.1 description:""
Sequence
MQPRRRQQQQQSILSFLQKKPAAAAGEEGATPERPPRPPAASVAGIMERLVRPPRQQQQG
RDQNASQARHVEQRALPVKNQTTSNECSSALFLESCNAGDNKAAMLIAEEGSNMTPLQEP
LKSLWPSKDDFVRASTLSPELGLDQNLPPHCPKKLPFESSNNNCIGANSSFEEFDVQTPQ
DTSKTVFWRSSRGADTPLTESDSDQTPLQHPSKFSFVSPNGEYVRGATLFALDSNYTPRR
ESSEKLSSGPSDLPYIKATKLFTEFDSNGTPSQNHLKKLSSVPKNDKRIGAGAELFSEFD
PSPLKPETPVMRAVIPRLKRVQEDQRVTTNDSCSPFWGPNKKVKPAQCSPVENKVHDEMA
ESARSKFEWLNPSNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDV
VLFFKVGKFYELYEVDAEIGQKELDWKMTISGVGKCRQVGISESGIDVAVEKLLARGYKV
GRIEQMESADQAKSRGSNSVILRKLVHVSTPSTVGDSNIGADAVHLLSLKEITLASNGSR
VYGFAFLDYAALKIWVGSVHDDDTFAALGALLVQVSPKEIIYETSGLSKETHRLIKKYAS
AGSVKMQLTPLYGLYFSDVSEIQTLIDSRGYFKASTSSWLSALNSSVNKDAVICALGGLV
SHLTRLMLEDALKNGEVLAYHVYRTCLRMDGQTLVNLEIFSNNFDGGSSGTLYKHLNHCI
TPCGKRLLRRWICHPLKDIDAINERLDIVEGFIQNCGLGSVTLEHLRKVPDLERLLGRVK
STVGLSSAVLLPFVGEKILKRRIKTFGMLVKGLRVGIDLLDILQRQDHGISALSKAVDIP
TLSSLGELIHHFEEAIDDDFPRYQDHSVKDDDANTLAMLVDLLVGKASEWFLVINALSTI
DVLRSFAAMALSSFGTTCRPNILLKGKAPVLQMKGLWHPYAFAESVNGLVSNDLSLGQDL
SGQNRFALLLTGPNMGGKSTIMRATCLAIVLAQLGCYVPCQSCELTLADAIFTRIGAMDR
IMSGESTFLVECTETASILENATEDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEAVRCR
LLFATHYHPLTKEFASHPHVTLQHMACMLKPRNGGEKELTFLYRLTSGACPESYGLQVAT
MAGLPRSIVERASAAGEMMRSKIAGNFRSSEERAEFSTLHEEWVRTIVAIGGVKDAHLDE
DTMDTLFCIFHELKAHFRKRR
Download sequence
Identical sequences A0A0D3EKC0
OBART01G05230.1

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