SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OBART02G15620.1 from Oryza barthii 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OBART02G15620.1
Domain Number 1 Region: 27-132
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.82e-17
Family B3 DNA binding domain 0.00078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) OBART02G15620.1
Sequence length 272
Comment pep:novel chromosome:ABRL00000000:2:13508623:13509441:1 gene:OBART02G15620 transcript:OBART02G15620.1 description:""
Sequence
MAASPPLPTSIDGGQVLDDMEVVEMKYLFGKALMPSDVSWDTEQLVIPDEHVGKLLDMVV
MNRPEGGFFVVVVEDGEVTGKLWLFRYWKRDDVHCLTKGWGCYAREKGLRAGDTVSFFHS
TACGRFFICCRRTCMSFLPLPTTSHRIHGSSVLPQPRAAQAAHHPFSGHATLCLGNKASD
HSAPARHATASLGCAAAQPPQVPPTPTPRRRRRSMMVHPEPPEHTTDGMPVILESMALVS
TPPVAKRVRLFGVYIDVPPLRPGGEATQDFNP
Download sequence
Identical sequences A0A0D3F4T9
OBART02G15620.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]