SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OBART04G30660.1 from Oryza barthii 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OBART04G30660.1
Domain Number 1 Region: 110-230
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.09e-26
Family B3 DNA binding domain 0.0051
Further Details:      
 
Weak hits

Sequence:  OBART04G30660.1
Domain Number - Region: 11-21
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.000183
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OBART04G30660.1
Sequence length 522
Comment pep:novel chromosome:ABRL00000000:4:27398429:27400778:-1 gene:OBART04G30660 transcript:OBART04G30660.1 description:""
Sequence
MARPPAATAPPPPPPPPPPPPIDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLP
DPLPSAHRFFLCTITAVDLSADTTTGEPYATISLLPLRHDAPPRPAAAELAEAESQEFRY
YAKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGT
PRRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGESACNARGR
VQPQEVMEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEA
EDTRRLAWLNGTLTNLRHQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVDFPPLPMGL
KISNNNISAPVCNGDSLLVPPILMHPQPQPPADIQGARHNNGHAYADIPSSSTPSMVRTQ
QLFPRDLQILVPHTDIVTPQNGSPPDNPVNTPLSASDGMKTIQLFGVTITSPVQGDTNGA
FASAQVNQVPEGVDDEPATEEASDTSLPDSLTNGHNQDGARL
Download sequence
Identical sequences A0A0D3G227
OBART04G30660.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]