SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OBART12G11990.1 from Oryza barthii 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OBART12G11990.1
Domain Number 1 Region: 109-245
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.14e-41
Family B3 DNA binding domain 0.0039
Further Details:      
 
Domain Number 2 Region: 683-757
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000000638
Family PB1 domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) OBART12G11990.1
Sequence length 874
Comment pep:novel chromosome:ABRL00000000:12:12739984:12744602:-1 gene:OBART12G11990 transcript:OBART12G11990.1 description:""
Sequence
MMFLPCLCDLEERPDSFLLLLLLSSVLFQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVE
LKAEPDTDEVYAQLTLLPEKQQDGNGSGNGYVSKDKVEEEEVVPPAATERPRVHSFCKTL
TASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHL
LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLA
TAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYEESLKRNHSIGMRFKMTFEGEEAAEQRF
TGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPR
TKRARPNVLASSPDLSAVNKEVASKVMANSQQNGLPRAFHSQENMNLRSRFGDSNELNTS
QKLTMWSSGSNQEKNNVSVQRELGSQSWMQMRRPDGSSEILSGFQPLKDTRNPLSSFPSQ
ISGNRSNTWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNYLMTPDITLPQRSLN
AKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSS
CMLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVNPLDGAQHDSATEK
HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG
ELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSFV
VCKNRRRHIHGRKESFRGVVVVAGALYVSGKPRSTPFVDGACPGISCPLFVFDKFWVCFV
EVLSYCMICPVVVKGAEAKLPRPVRLLACALPPS
Download sequence
Identical sequences A0A0D3HUG1
OBART12G11990.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]