SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSNLEP00000004046 from Nomascus leucogenys 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSNLEP00000004046
Domain Number 1 Region: 223-390
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.53e-17
Family Canonical RBD 0.00079
Further Details:      
 
Domain Number 2 Region: 436-529
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 8.19e-17
Family Canonical RBD 0.0015
Further Details:      
 
Domain Number 3 Region: 28-194
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.00000000144
Family DnaQ-like 3'-5' exonuclease 0.0088
Further Details:      
 
Weak hits

Sequence:  ENSNLEP00000004046
Domain Number - Region: 626-666
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0115
Family Canonical RBD 0.0084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSNLEP00000004046   Gene: ENSNLEG00000003241   Transcript: ENSNLET00000004244
Sequence length 681
Comment pep:known_by_projection supercontig:Nleu1.0:GL397315.1:8904200:8975560:1 gene:ENSNLEG00000003241 transcript:ENSNLET00000004244 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
XXSPDYLVVLFGITAGATLWTKLGSDEKELILLFWKVVDLANKKVGQLHEVLVRPDQLEL
TEDCKEETKIDVESLSSASQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHP
EASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTEYLNFEKNSSVSRYGASQ
VEDMGNIILAMISEPYNHRFSDPERVNYKFESGNSSKMELIDDNTVVRARGLPWQSSDQD
IARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKA
TGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGIL
FVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP
LIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMV
LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVLMGGTLNRN
GLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVILNPRALQPSTAYYPAGTQLFMN
YTAYYPSPPGSPNSLGYFPTAANLSGVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQYAT
EDGLIHTNDQARTLPKEWVCI
Download sequence
Identical sequences ENSNLEP00000004046 ENSNLEP00000004046

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]