SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSNLEP00000019433 from Nomascus leucogenys 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSNLEP00000019433
Domain Number 1 Region: 19-210,298-347
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.75e-18
Family WD40-repeat 0.012
Further Details:      
 
Weak hits

Sequence:  ENSNLEP00000019433
Domain Number - Region: 871-991
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 0.0706
Family Regulator of chromosome condensation RCC1 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSNLEP00000019433   Gene: ENSNLEG00000016024   Transcript: ENSNLET00000020417
Sequence length 1410
Comment pep:known_by_projection supercontig:Nleu1.0:GL397390.1:1826316:1958885:1 gene:ENSNLEG00000016024 transcript:ENSNLET00000020417 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASVSEPVTFREFCPLYYLLNAIPTKIQKGFRSIVVYLTALDTNGDYIAVGSSIGMLYLY
CRHLNQMRKYNFEGKTESITVVKLLSCFDDLVAAGTASGRVAVFQLVSSLPGRNKQLRRF
DVTGIHKNSITALAWSPNGMKLFSGDDKGKIVYSSLDLDQGLCNSQLVLEEPSSIVQLDY
SQKVLLVSTLQRSLLFYTEEKSVRQIGTQPRKSTGKFGACFIPGLCKQSDLTLYASRPGL
RLWKADVHGTVQATFILKDAFAGGVKPFELHPRLESSNSGSCSLPERHLGLVSCFFQEGW
VLSWNEYSIYLLDTVNQATIAGLEGSGDIVSVSCTGNEIFFLKGDRNIIRISSRPEGLTS
IVRNGLEMSGCSERVHMQQAEKLPGATVCETRLRVSSVASSVASEPRSRSSSLNSTDSGS
GLLPPGLQATAELGKGSQPPSQRFNAISSEDFDQELVVKPIKVKRKKKKKKTEGGSRSTC
HSSLESTPCSEFPGDSPQSLNTDLLSMTSSVLGSSVDQLSAESPDQESGFSGEVNGVPQE
NTDPETFNVLEVPGSVPDSVAEEDDIRTEMPHCHHAHGQELLNGVREDVGGSDVTGLEDE
PCPADDGPNSTQLPFQEQDSSPGVHDGEDVQPIGPQSTFCEAPLLNSLTVPSSLSWAPCA
EQWLPGTRADEGSPVEPSQEQDILTSMEASGHLSTNLWHAVTDDDTGQKETPISERVLGS
VGGQLTPVSALAASTHKPWLEQPPRDQALTSSDEEDIYAHGLPSSSSETSVTELGPSRSQ
QDLSRLGAEDAGLLKPDQFAESWMGYSGPGYGILSLVVSEKYIWCLDYKGGLFCSALPGA
GLRWQKFEDAVQQVAVSPSGALLWKIEQKSNRAFACGKVTIKGKRHWYEALPQAVFVALS
DDTAWIIRTSGDLYLQTGLSVDRPCARAVKVDCPYPLSQITARNNVVWALTEQRALLYRE
GVSSFCPEGEQWKCDIVSERQALEPVCITLGDQQTLWALDIHGNLWFRTGIISKKPQGDD
DHWWQVSITDYVVFDQCSLFQTIIHATHSVATAAQAPVEKVADKLRMAFWSQQLQCQPSL
LGVNNSGVWISSGKNEFHVAKGSLIGTYWNHVVPRGTASATKWAFVLASAAPTKEGSFLW
LCQSSKDLCSVSAQSAQSRPSTVQLPPDAEMRAYAACQDALWALDSLGQVFIRTLSNSCP
TGMHWTRLDLSQLGTATSVHLPXXXXXXXXXXXGGVYFRVGTQPLNPSLMLPAWIMIEPP
VQPAGVSLVSVHSSPNDQMLWVLDSRWNVHVRTGITEEMPVGTAWEHVPGLQACQLALST
RTVWARCPNGDLARRYGVTDKNPAGDYWKKIPGSVSCFTVTASDELWAVGPPGYLLQRLT
KTFSHSHGTQKSSQAAMPHPEDLEDEWEVI
Download sequence
Identical sequences ENSNLEP00000019433 ENSNLEP00000019433

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]