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Domain assignment for gi|374312080|ref|YP_005058510.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374312080|ref|YP_005058510.1|
Domain Number 1 Region: 28-128
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 1.29e-30
Family Sigma2 domain of RNA polymerase sigma factors 0.00053
Further Details:      
 
Domain Number 2 Region: 149-212
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 2.06e-16
Family Sigma4 domain 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|374312080|ref|YP_005058510.1|
Sequence length 223
Comment ECF subfamily RNA polymerase sigma-24 subunit [Granulicella mallensis MP5ACTX8]
Sequence
MAVQTQSTTEDLTDLPPEIVATLQAEPPHPDLELVERAKAGDTSAFEQLVRQYDRQIFRT
AQHITQNREDAEDITQDVFFKAFQKLDQFQGNSKFSTWLVRIAVNESLMRLRKRKTSKTV
SMDQDVQTDEGSIPRDFAEWRPNPEQNYSQSELAEILRKTIAGLPPGFRTVFTLRDIENL
STEETAEALGLSVPAVKSRLLRARLQLRERLSRYFRKTKEGSK
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Identical sequences G8NT50
gi|374312080|ref|YP_005058510.1|

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