SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|345005282|ref|YP_004808135.1| from halophilic archaeon DL31

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|345005282|ref|YP_004808135.1|
Domain Number 1 Region: 1-250
Classification Level Classification E-value
Superfamily NIF3 (NGG1p interacting factor 3)-like 4.84e-64
Family NIF3 (NGG1p interacting factor 3)-like 0.0000154
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|345005282|ref|YP_004808135.1|
Sequence length 255
Comment NGG1p interacting factor 3 protein, NIF3 [halophilic archaeon DL31]
Sequence
MQRAPFVDRLDAELRTADYADIDASPNGLQVGRRAGEVEHVAFAVDAAEATIEAAVAAGA
DMLVTHHGVIFGGLDRVTGRAYDRIAPLVEHDIALYVSHLPLDGHPELGNAAGVADCLSL
EELEPFGTMGPETVGLVGDRAEPLLLSDLTKTLDSALDTGDRSVQTLDFGPDEAERVAVL
TGSGVDWLDEAREVGADTLVTGEGKQQVYHEAREAGINVVLAGHYATETFGVRALQELAE
EWGLETTYIDHPTGL
Download sequence
Identical sequences G2MLT5
WP_014051539.1.75361 gi|345005282|ref|YP_004808135.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]