SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|530549688|ref|YP_008430242.1| from Thermococcus litoralis DSM 5473

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|530549688|ref|YP_008430242.1|
Domain Number 1 Region: 135-385
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 9.77e-72
Family Extended AAA-ATPase domain 0.00000108
Further Details:      
 
Weak hits

Sequence:  gi|530549688|ref|YP_008430242.1|
Domain Number - Region: 16-57
Classification Level Classification E-value
Superfamily Mitotic arrest deficient-like 1, Mad1 0.000641
Family Mitotic arrest deficient-like 1, Mad1 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|530549688|ref|YP_008430242.1|
Sequence length 399
Comment ATPase AAA [Thermococcus litoralis DSM 5473]
Sequence
MSDVEDVNVKHEEGYDDYVYYLKRRIRQFELQVRTLEADKERLERELSRLRMEMSRMRQP
PAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIEREKLKPGARVALDQRTMAVIELLPS
QKDPSVLGFEVIERPKVTYNDIGGLKKQLMELREAIELPLKHPELFERVGIEPPKGVLLY
GPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVSELFELAREKAPSIVFID
EIDAIGAKRLDETTGGEREVNRTLMQLLAELDGFDPRGNVKVIAATNRPDILDPALLRPG
RFDRLIEVPLPDFKGRWEILKVHTRKMNLKGVDLKAIAEMTEGASGADLKAIVTEAGMFA
IRARREYVTHEDFIKAVEKVLGSEERLAQQIASHEVMYG
Download sequence
Identical sequences H3ZJP7
gi|530549688|ref|YP_008430242.1| WP_004066224.1.73549

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]