SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|336253006|ref|YP_004596113.1| from Halopiger xanaduensis SH-6

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|336253006|ref|YP_004596113.1|
Domain Number 1 Region: 349-544
Classification Level Classification E-value
Superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 8.63e-58
Family 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 0.0000236
Further Details:      
 
Domain Number 2 Region: 64-350
Classification Level Classification E-value
Superfamily Metallo-dependent phosphatases 6.96e-55
Family 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 0.00064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|336253006|ref|YP_004596113.1|
Sequence length 546
Comment 5'-nucleotidase [Halopiger xanaduensis SH-6]
Sequence
MSERSTPKLERRRLLTALSGVGTAALAGCSSEESDAAEPSENETDDRDGNESDREENGDE
SETETTSLRLLHDTHFHGKLGDSEEPLNVANYFGLIDELRAEADDAVAVGNGDDLHMSVE
SSVFDGEHITSILNESPVSYNTIGNHEFDAGPESLRENIAASEFTWVTANVLEAGTDRPF
ASDEGVVRYATEEIGGVRVGFTGFAPADTPDVTSVGDDVEVLEPTAAAEAVVADLQDEGA
DLIVALSHIASPEAEELAAAVDGIDVVVGDHAAYVADEPAEVNETILSFVGDEFDYVGQL
DLEIADGDVVDYAFERHDLAALVEDGEVEPHEEIRELLTDYESQLEDELGEVIGETAVDL
DTRRETVRQAESNFGNWLADLIREDVDADVAIQNGGGIRSDQLYEAGEITRGMIVDILPF
PNYTTKLEITGEALKAAIEHGVGAVEDGHGRFPQVSGLSFVYDPDAEAGQRVQELTVGGE
PVDLEATYELGTNDFLAGGGDGYEMLANADVLVSSDEGTLLSALAIAAIEDAGTIAPETE
GRIETV
Download sequence
Identical sequences F8D3Y1
WP_013879129.1.76661 gi|336253006|ref|YP_004596113.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]