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Domain assignment for ORGLA05G0222700.1 from Oryza glaberrima

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ORGLA05G0222700.1
Domain Number 1 Region: 136-258
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.75e-43
Family B3 DNA binding domain 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ORGLA05G0222700.1
Sequence length 712
Comment pep:known scaffold:1.0:Oglab05_0154:168407:173104:1 gene:ORGLA05G0222700 transcript:ORGLA05G0222700.1
Sequence
MTGIDLNTVEEDEEEAAEEVAANGSSPAPARAGAVCLELWHACAGPVAPLPRKGGVVVYL
PQGHLEHLGDASAAAAAAAAVPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRA
DDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQ
ELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGV
RRAAQLKNGSAFPALYNQCSNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMK
SLSQPFSVGLRFKMRYESEDATERRYTGIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRR
PNRVSPWEIELTSSVSGSHLSTPHSKRLKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVL
QGQELLGFKSHGGTAAATSQPCEARHLQYIDERSCSSDASNSILGVPRLVDRAPLGNPGF
SYHCSGFGESQRLQKVLQGQELFRPYRGTLVDASMGSNGFHQQDSPRAPGVVNKWQAQLH
GRAAFHGPPAPALPSQSSSPPSVLMFQQANSKMPRLEFGHGQLDKHENDRRVRFGPSEGI
ERREQRIPLQPYPTSGEVIDGQVTVEKSHSPGRHGKDGPDNKAVGTNSCKIFGISLTEKV
PAREELDDGDANYSLQSLKQVPKSLGNSCATVHEQRPVVGRVIDISTMDMMI
Download sequence
Identical sequences I1PXX9
ORGLA05G0222700.1

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