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Domain assignment for ORGLA01G0022600.1 from Oryza glaberrima

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ORGLA01G0022600.1
Domain Number 1 Region: 184-295
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.89e-30
Family B3 DNA binding domain 0.0000125
Further Details:      
 
Domain Number 2 Region: 72-128
Classification Level Classification E-value
Superfamily DNA-binding domain 1.63e-17
Family GCC-box binding domain 0.00077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ORGLA01G0022600.1
Sequence length 372
Comment pep:known scaffold:1.0:Oglab01_0017:162232:163350:1 gene:ORGLA01G0022600 transcript:ORGLA01G0022600.1
Sequence
MGVVSFSSTSSGASTATTESGGAVRMSPEPVVAVAAAAQQLPVMKGVDSADEVVTSKPAA
AAAAAAVAQQSSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRYRG
RDAATNFPGAAASAAELAFLAAHSKAEIVDMLRKHTYADELRQGLRRGRGMGARAQPTPS
WAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRHAASSDSASAATGKGVLLNFEDGE
GKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDKLLFIDCKKNNA
AVAATTTCAGDERPTTTTSGAEPRVVRLFGVDIAGGDCRKRERAVEMGQEAFLLKRQCVV
HQRTPVLGALLL
Download sequence
Identical sequences I1NK36
ORGLA01G0022600.1

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