SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ORGLA03G0244900.1 from Oryza glaberrima

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ORGLA03G0244900.1
Domain Number 1 Region: 202-305
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.12e-20
Family B3 DNA binding domain 0.0049
Further Details:      
 
Domain Number 2 Region: 42-124
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.32e-20
Family B3 DNA binding domain 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ORGLA03G0244900.1
Sequence length 306
Comment pep:novel scaffold:1.0:Oglab03_0056:243303:245315:1 gene:ORGLA03G0244900 transcript:ORGLA03G0244900.1
Sequence
MVKILKTTLRATTMLKVLVKIRLSLFLIFSVLXLMLIMYMASHKTIPNEFLHNFGGKIPK
SIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDFLVFKYSGDSQLKTLIFD
SSGCEKVCEKPVDMSGRSYDIAMRNSQDEKKKRKQRDISRQGTVKPSEEGLKAELVPGCI
LPSRTDLTRLQKNILTEKVKAINSETPIYGYVMNNSSIHGIPCTVEISKKYADVYLPFED
GTVVLQHHGKSWNVRCCLTKQNSKRFLKGWRQFAGDNKLHLGDICLFDLLKDKKKYVMDV
HIIRRK
Download sequence
Identical sequences I1PDK3
ORGLA03G0244900.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]