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Domain assignment for ORGLA07G0207500.1 from Oryza glaberrima

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ORGLA07G0207500.1
Domain Number 1 Region: 360-463
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.01e-21
Family B3 DNA binding domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ORGLA07G0207500.1
Sequence length 949
Comment pep:known scaffold:1.0:Oglab07_0147:625057:631037:-1 gene:ORGLA07G0207500 transcript:ORGLA07G0207500.1
Sequence
MAGMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLV
FCDIFHQKESGWRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNSAVQSVPSPVV
PKLFSSQNNQRLFGKSDDLLSGRPLETSSLMVDARNDDLTIIAKNNLPFMVKNVEAGQSS
NILRQKELENGARQIKWELPTLSIGDMGRIPFLTRSQSALESRRDENKDPTTESTTSESL
SEACLNMSLGIASNGNKLEATSTVERPMLSPTTGFPEGRELTTALSPFQHAQRARHFLTR
PPRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIV
PLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDAKGKEWHFQFRFWPNN
NSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTVSLPDSQISAIANG
SILGDTLFSSTNENLAIVSGYSGFLQSIKGAADLHTSSIYDHHVNSADGDVSWLKTDKFG
SRPDEGSLQFLKRGRNIGSKSRRLSMDAEEAWELKLYWDEVQELLRPAPTAKPTVVMIED
YEIEEYDEPPVFAKRSIFTIRSTGEQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDS
KSCSCSAPEELTPKELHIVLQQYEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGDVG
NQGSPSVATTTKHPRHRPGCTCIVCIQPPSGKGPKHNPACTCNVCMTVRRRFKTLMMRKK
QRQSEREEAEASKKIAWMNRDEPEGSSLSRSPQTVDTTRDGDVTMFDKVDINKGHIDLNF
HPTAVRDEERHGGQPRVSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQ
PALVEREERTSNNDGGRVATAEQPESMAVDEAGDNQPDKAAGDSAAALA
Download sequence
Identical sequences I1QD83
ORGLA07G0207500.1

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