SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSONIP00000017216 from Oreochromis niloticus 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSONIP00000017216
Domain Number 1 Region: 527-589
Classification Level Classification E-value
Superfamily F-box domain 0.0000000000419
Family F-box domain 0.0054
Further Details:      
 
Domain Number 2 Region: 619-794
Classification Level Classification E-value
Superfamily RNI-like 0.0000000000958
Family 28-residue LRR 0.053
Further Details:      
 
Weak hits

Sequence:  ENSONIP00000017216
Domain Number - Region: 3-37
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0962
Family Classic zinc finger, C2H2 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSONIP00000017216   Gene: ENSONIG00000013680   Transcript: ENSONIT00000017231
Sequence length 846
Comment pep:novel scaffold:Orenil1.0:GL831291.1:673696:684030:-1 gene:ENSONIG00000013680 transcript:ENSONIT00000017231 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SSSSELPYFCPRCGDGFRFSSVTELRAHLVSRHTYETLLVLSQFEQGEVGVCSGEEKMVK
VSQPPKATESAQDRMVWRPMRRSRSSTLFQARVRSSRTSSLLPLPSPAVSQSQSPSLDME
HQSLPLPLACLDLASSSASVQLLREMFGASDCPLPSSTVHSEGPSTALALPGSVDLFAGK
NLGEVGVQLGLVEIGLEERLGLGLDHKIARTFAEVEERVNRRMGRLKVELQRREMELQRA
RRDKERLRSEKQEVEEKAAYLSRQVSAAMEMMEKLKKDLTGKEKELSKQQQEMVDIEYFL
RETAEKEAKAKSRLQMFIETLLERADRAERRLLMLGSHEHRNLFPDSDGYAYTEPYVLTL
GEQLHGHHHYRYLNTPDSVKEFTVSSSSGLAGRMRTSSLGSGGWNCEAASTHLHPKPYAQ
PWTQRERGEDGRRERFWAAEEGWGRTWNKRNFRHHSTEEEDEEEEEEEEGLWSSAEMRRL
IFARTHTPGSVLCSPDPDTSSSVRSTPSRCFGDRQLVADTLRLRAGLFCIFPYLDVHSLL
RAAEVCSDWRFVARHPAVWTRLQLENARVSTEFLTTLSQWCTQTQSVVFSNLKPRSRRAN
ETREDYHRNIRGSVEPGVEALLRSAGGSLLHLSISQCPHILTDRTLWLASCYSRNLQTLT
YRSSSDPLGQEVLWALGAGCRSITSLQVAPAHPCQQPTRFGNRCLQTIGRCWPHLRSLSV
GGAGCGTQGLVAAVRSCTQLQVLELERITDLGLQAATELCKAGLKKNLQTLILTHTPVSG
QAILHFHSECENIRSIIVEVSASDYFEEPDTEEAQHLFGEILSTLKVLQTRPGLSDVLRV
KADSFS
Download sequence
Identical sequences I3K7X1
ENSONIP00000017216 ENSONIP00000017216

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]