SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EMT24198 from Aegilops tauschii 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EMT24198
Domain Number 1 Region: 77-423
Classification Level Classification E-value
Superfamily RNI-like 1.88e-70
Family 28-residue LRR 0.063
Further Details:      
 
Domain Number 2 Region: 787-1093
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 2.29e-70
Family Protein kinases, catalytic subunit 0.00015
Further Details:      
 
Domain Number 3 Region: 342-709
Classification Level Classification E-value
Superfamily RNI-like 4.79e-68
Family Cyclin A/CDK2-associated p19, Skp2 0.018
Further Details:      
 
Domain Number 4 Region: 1126-1235
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 0.00000301
Family Protein kinases, catalytic subunit 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) EMT24198
Sequence length 1317
Comment pep:novel supercontig:GCA_000347335.1:Scaffold19124:41641:46784:1 gene:F775_21551 transcript:EMT24198 description:"LRR receptor-like serine/threonine-protein kinase GSO2 "
Sequence
MAARLCICMAALLVSLMPCGAAQPASSNAADLAALLAFKAQVEDPLGILAGNWTAAASPC
SWVGVSCDRRGQRVTGLEFDGVPLHGSIGPQLGNLSFLSSLVLSNTSLAGPVPSELGGLP
RLQNLVLSYNSLSGAIPSALGNLTGLQSLYLDSNNFFGAIPYEFQHLRKLQSLRLSHNDL
SGPIPPGLFNNTPDLRVVRLGSNRLTGAIPDSIGSSSKLEWLVLEGNLLSGPMPPAIFNM
SQLQVIAITRNNLSGPIPGNESFYLPMLEVLSLNENQFEGPIPPGLSACRNLDTLSLAVN
DFTGPVPSWLATMPNLTRIYLSTNGLTGKIPVELSNHTELLGLDLSQNKLEGGIPPEFGR
LTNLRFMSFANNRITGPIPDSIGNLSNLTTIDFYGNGLTGSVPISFGNLLNLRRIWLDGN
QLSGNLDFLSAFSNCRSLNTISMANNTFTGSLPAYIGNLSTVLETFIADNNRITGSIPGT
FANLTNLLTLSLSGNQLNGTIPTPITAMSNLQELNLANNSLSGTIPAEISGLTSLAKLHL
DSNRLIGPIPSSVSNLSQIQIMTLSRNSLSSNIPTSLWRQQKLIELDLSQNSFSGSLTED
VGKLTAITELDLSSNQLSGDIPTSFGALQMMINLNLSRNLLEGSIPDSLGKNLLEGSIPD
SLGKLLSIEELDFSSNALSGAIPKSLANLTYLTNLNLSFNRLDGQIPEGGVFTNITFKSL
MGNSALCGLPRLGIAPCQNNTHSRSKQLLLKVIVRAVVTLSILSACMYMLVRRKMNKQGK
MSLPSNTDLTNYQLISYHELVRATSNFSDDNLLGAGGFGKVFKGQLDDESVIAIKVLNMQ
DEVASKSFDTECRALRMARHRNLVRIISTCSNLDFKALVLEYMPNGSLDDWLHSSERRHI
SFLQRLGIMLDVAMAVEYLHHRHFEVVLHFDLKPSNILLDMDMTAHVADFGISKLLVGDD
NSIVLTSMPGTVGYMAPEFGSTGKASRKSDVYSFGIVLLEVFTRKKPTDPMFAGELSLRQ
WVNQAFPCELSSVTDRGLLQDEPKHGIDKISNPSEDSSAVLNTFLVSIVELGLVCSRTAP
DERMPMDDVVVRLNKIKSNYCSQRNCFYRSGCGRRTANQCVKASTGKASRMSDVFSYGIM
MLEVFTGKRPTDPLFYEELSLRQWVTEAFPTRLIDVVDNEVLSHGIKSDCHDGNDSTSRE
QSIILNTCLASVIEFSLQCSSTISDERTAMDKVVVKLNKRVHKQAGMICVGGAQRRQPRT
PYGMSRGIQGKEIPGETEAGRKNVASRAGRRLDETFEEGKGGIVLHGGSGGGGVLPE
Download sequence
Identical sequences M8BQV6
EMT24198

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]