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Domain assignment for PH01000176G0540 from Phyllostachys heterocyclavar. pubescens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PH01000176G0540
Domain Number 1 Region: 124-253
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.19e-36
Family B3 DNA binding domain 0.0098
Further Details:      
 
Domain Number 2 Region: 1000-1067
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000373
Family PB1 domain 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PH01000176G0540
Sequence length 1121
Comment PH_genemodel_v1 PH01000176..385219..394541 . + . ID=PH01000176G0540;Name=auxin response factor 19, putative, expressed
Sequence
MMRQQQPASSAGAAAGSECEGEKKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQ
VAASMQKDIDAHVPSYPDLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQL
SELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRSAEKIFPSLDFSMQPPAQELHARDL
HDNVWTFRHIFRGQPKRHLLTTGWSLFVSGKRDDKQQLLLGIRRANRQPTNISSSVLSSD
SMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFE
TEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPF
FICPPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDSQTQNTVMPGLSLVQWMN
INMQQSSSFANTAMQSEYLRSLSNPSMQNIGAADLSRQLCLQNQLPQQNSMQFNAPKLPQ
QMHPINELSKAALPLNQLGVSTKPQEQIQDASNLQRQQQSMNQLLPLSQAQMQQQQQQLS
MSQNQQPATSQPLLPHHHHQQQHQQKLLQQQQQQQLLLQQQQLQQQQQQHQNQQQQQLNK
MPAQLPNLANQQLQLSDQQLQVQLLQNLQQQQLSLLSQPSVTLAQLPIIQEQQKMLLDMQ
QQLSNSHSLTQQQMMPQQSTKVPSQAAPLPPPMQQESQQKLPKKQAVPADTSETAIPPNA
SLNVISANGSPLMMTCATHSVVTEEIPSCSTSPSTANGNHLLHPVVGRNQHCTIINTKKV
PQSTAPMSVPSSLDVVTATPRMTKELPKLNPNVKQSVMASKLPNAAAGPQNFVNNAPPTD
YLETASSATSVWLSQTDGLLHQSFPMSNFNQQQMFKDAPPDTEIHGEDPSNNALFGISND
AHLGFPVGADSFLTNGIDAAKYQNHISTDIDNNYRIPKDAQQEISSSMVSQSFGASDMAF
NSIDSGINDGAFLNRSSWPPAPPLKRMRTFTKVYKRGAVGRSIDISQFSGYDELKHALAR
MFSIEGQLEEWQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG
DLGNNILPNQACSSSDGGNAWRARCNQNSGNLSTGSYDQFE
Download sequence
Identical sequences PH01000176G0540

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