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Domain assignment for PH01000623G0440 from Phyllostachys heterocyclavar. pubescens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PH01000623G0440
Domain Number 1 Region: 147-251
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.75e-36
Family B3 DNA binding domain 0.0042
Further Details:      
 
Domain Number 2 Region: 995-1059
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000804
Family PB1 domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PH01000623G0440
Sequence length 1186
Comment PH_genemodel_v1 PH01000623..287209..295699 . + . ID=PH01000623G0440;Name=auxin response factor, putative, expressed
Sequence
MAAPASSGGGGGEAEGEGRRTKVNQELWYACAGPLVALPPAGSLVVYFPQGHSEQFCISC
LVLVANCSRAGNSSLRLSPVAASMRKDAHAQIPSYRNLPSKLICILHNVTMHADPDTDEV
YARMTLQPVSNVTQCDKDILLASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAE
RIFPRLDFSMQPPVQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDS
VLFISDSMHIGILAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQFSLGMR
FRMMFETEESGTRRYMGTITGISDLDPVRWKSSQWRNLQVAWDEAAPSERRTRVSLWEME
PVIAPFFIYPSPLFTAKRARQPGMTDDETYEMENLVKRTMPWLGEEICKKDLNTQNSIVP
GLNLVQWMNMQQNPSLAGTVMQPELLNSLAGKPVQNLSAADISRQISFQPQFLQQNNIHF
NTSLLPQQNQQTEQLAKVIATPNQLGNVIVPQKAVQDCNFDQKQHVVTQSVQGSQPKINI
AQPQLVVQAQFQQPQVTLQAQLQQPQVVVQAQLQQQQPLVQSHTVLQGGLQQIQLLQQPQ
QQPHLQHQPQQQLQPQHHQQVQHSVQEQQQIKIQPVHASSDANMNTQLSDHQMKLQLLKA
LQPQQPLILEQQKMLLELQQQLVNSQSTPQQCAQGTTQTVGIHNSNTIQYPTQQKAQPHQ
PVQDLPGNAIPIAKSDIITSMGASSLHAAGGMQLLKTDDVPSLSTSPSTNSNPVLLQSIP
SSSKNQSLPTAAKTSQSSVVLGPTIEQDVKPYQSVKPTVMIPTMAEQRPATGQDYINNNP
QMDYLDTSSSATSVCLSQADGSLQQNFPPSSFNHHQLLRDTVPDSEFQVTDPRNNLLFGV
NIDGQLGLPLNADALLANNIETEKYTDQMPGNGISNYISSKDSQQELSSSMISHSFGVAD
MTFNSIDSAINDTPFLNRNSRASAPAHQRMRTYTKVHKRGAVGRSIDINRYSGYDELKHD
IARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEGKPVHSRLKKQYADNLLSALF
PEQKNGPTKKPHTIATQTNPKRIGAEAEPKKMRRNPGGRSCGGSPKEMWRNPIEAMSKAW
SREAPGETQRAWVGVEMARSRGSEVLRIRRRRRLRRMDEPSRSRSG
Download sequence
Identical sequences PH01000623G0440

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