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Domain assignment for PITA_000005040-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000005040-RA
Domain Number 1 Region: 183-262
Classification Level Classification E-value
Superfamily SBT domain 1.18e-37
Family SBT domain 0.0000286
Further Details:      
 
Domain Number 2 Region: 916-1039
Classification Level Classification E-value
Superfamily Ankyrin repeat 0.000000000653
Family Ankyrin repeat 0.0086
Further Details:      
 
Weak hits

Sequence:  PITA_000005040-RA
Domain Number - Region: 780-861
Classification Level Classification E-value
Superfamily Viral protein domain 0.00403
Family Influenza hemagglutinin headpiece 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PITA_000005040-RA
Sequence length 1146
Comment protein AED:0.09 eAED:0.09 QI:0|1|0.8|1|1|1|10|825|1146
Sequence
MDGKAGPQVATPFFQHQLLSGPLYEPSLGAKRCVEPADSSWTRTNWQHQQQQKSPPVYEA
PKPNWNVNVWDWDSVRFIAKPADLANHREPNPSNIKPQASPEILRLGSNDIGSNVVNGPS
FPDQKRKLDEPPKPFLPGKDSSENDPGNLTLKLGGSSYSYADDTNPSRQNKRVRSGSPGS
AYPMCQVDDCRTDLTSAKDYHRRHKVCETHSKASKALVGSLMQRFCQQCSRFHPLQEFDE
GKRSCRRRLAGHNRRRRKTQPEDALPRGLLAASQENGGLGNLDIVSLVSILSRLQGNNSS
MEKSNGQSSLDGDQVVQLLNRMNSSFPSSQKVAPPSEGFDLNIAQNLQSPRSEVPKANGS
PSTGLTTELLAILSALTGPSHDALALLRNSLATNLKGNLKAHHQNVLPPSPTPVAPQKPQ
ERDIQNQKTNLIVDSGANNRKINATYQDNSRTHLPLRLFNSLEEDNSPPNAFTRKYFSSD
SSNPTERSPSSSPPVVQNLFPLHSGDESRENDCVSVCKEDNLTLETSPSNDRCSAYELSK
LESRVHNQNFMSGFLHQSLESRTAVVQPSYTSSSGSDQSPASSNSDSQERTGRIIFKLFG
QHPSNFPVALRAQILEWLSHSPSDMESYIRPGCVILSIFVSMPSANWERLREDLPQRLKL
LVEDSRTDFWRCGRVLVQAEQRLASSNDGKVRFCSSWRSWDAPEIYFVQPVAVVAGQETT
ITLRGHNLATTGTKILCAYRGKYTSIDVLPEEEASECIPTDSRVQKFTFSGGPPNALGRC
FIEVEHGFKGNCFPVIVADPIICRELQSLESEIEIEFSSDKTSSIKVERSQEHFQGYSAA
TARDEVIRFLNELGWLFQKSSERQAELNVVKDASFLEFSSDRFKFLFIYAVERDMCALLK
KLLDIFFEMNAGQEASAPESSKNLLESNLLHRAVKRNCKQMVDLLLNYAPSPNNMNLLQT
KSFIFPPNLTGPGGLTPLHLAASIRNSEPLVDALTSDPQDVGLQSWSTALDSSGQTPHAY
ALLRNNHSYNRLVERKLADRKYGQVSITISNNEPSLDGIADVNGSHTGSSVLSLQKLPQS
CAQCMIFSNKRVRRITGSPGALYRPYMHSILAIAAVCVCVCLYFHGPPHVGSSGPFKWEN
VDFGPA
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Identical sequences PITA_000005040-RA

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