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Domain assignment for PITA_000003491-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000003491-RA
Domain Number 1 Region: 255-327
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.7e-26
Family B3 DNA binding domain 0.019
Further Details:      
 
Domain Number 2 Region: 765-844
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000000589
Family PB1 domain 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PITA_000003491-RA
Sequence length 896
Comment protein AED:0.13 eAED:0.16 QI:0|0.69|0.64|1|1|1|14|984|896
Sequence
MPAALPYRTLPGRPAGRSRPNFAPDFATKPAEILGRRQGTNFLGEQVAVVVVVGIVVVVG
VVGSNLRRHVRGLIPKSLGGFSLWSRGGREVVGGFAWFGWFCFWRASVSPVLSQILAHSC
PEIPISIHPDIDGSPMVNFVGGEQQHMGFDAGNDADLYEELWHACAGPLVTVPRVGERVF
YFPQGHMEQVEASTNQGADQQMPLYNLMPRILCRVINLQLKAEQETDEVYAQITLLPEAE
QNEPCSDAGPAPLPKTKKNVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPT
QELVAKDLHGTEWRFRHIFRGGTSQSEFIIPYDKYMEAVNSNLSVGMRFKMRFEGEEAPE
RRFTGTIIGIGDVDPSRWPSSKWRSLKVQWDETCAIPRPDRVSPWEIEPFVAPPALNPQP
VPRNKRPRTNGLPTSTDMLGSCRTSVDSTSVLRYPRTLQGQDMKTGGDIEVESIQKPILW
GAKLNDAKLDCGGLASQKLPPGSENWMVIHRLEPAFSDSFGGLQGHGEGSLSQNAENTRH
VNLPMKMFQDHETGALDASTIKLQLSNAWPIPFSSSMMNESDLKLSVTSPMSTQRHCGSL
RHVGMNGSPRCSNLAVGESPGSWFMSYVPPEIEGSEEPTSGNGITVGKIQSSNLTDTSQS
GTPTWELPKDKRVDSVSNYKLFGFHLIDNITPDEVTPGTSIASVAVEDLQLCNALRSKEV
HIAEPDQVSDPPKAIKYEPPAVSCDQEKPLQKLSKETQVKQHGNPTRSCTKVHKQGIALG
RAVDLTKFEGYEELICELERMFNIEGELRNPSKGWQVVYTDNEGDMMLVGDDPWQEFCSI
VRKIFIYTREEVEKMTPQKHAKLQGCSDEQPTTRETSKHSLSELQESTLPAASVDA
Download sequence
Identical sequences PITA_000003491-RA

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