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Domain assignment for PITA_000033561-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000033561-RA
Domain Number 1 Region: 117-245
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.28e-41
Family B3 DNA binding domain 0.0045
Further Details:      
 
Domain Number 2 Region: 757-819
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000981
Family PB1 domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PITA_000033561-RA
Sequence length 872
Comment protein AED:0.16 eAED:0.16 QI:0|0.87|0.82|1|0.93|0.82|17|978|872
Sequence
MKPPSNGYLPQPQDGERRSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDGHIPNYPSLPSKLICQLHNVTLHADVETDEVYAQMTLQPVNTHDKEALLPSDLSLKQS
KQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYTMQPPAQELVARDLHDHAWTFR
HIYRGQPKRHLLTTGWSVFVSAKRLFAGDSVLFIRRANRQQATISSSVLSSDSMHIGVLA
AAAHAASNHSPFTVFYNPRASPSEFVIPLSKYNKAIYGTQVSLGMRFRMMFETEESVVRR
YMGTITGISDLDSMKWPNSQWRNIQVGWDESTAGERQNRVSIWEIEPVATPFFICPPPFF
RPKRPRQPGMLGEESEIESAIKRSPLWFGEETGIVNSQNPTMPGVGLLQWMNMHQRPDII
NSAIQSDYYRPMAAATLQKLGSSDITKPLNSPQQALQSHQLQFSIPQSQQSELHQPQIMW
SQQQHHLSNQQQHLYTQQQHLQQSIQLPELRGQLLQSTSSRSQAAANIPLSTKAQSGFTE
TDAPSCSTSTSANSYPLQNILTRANQSAIMNDEKPQCANMPRHSASSTQAALPASNFLGD
PQVTSLLPTIKEPNQAALQTYMSAQMGQMEASSSSGTSYSLTPDVSISQNLPLLPLQSSP
FLLQDVSHDNDIQTDPRRNVLPTFSNGKDIQAHASATISSQTFSVPDLPLNSGVTSDLGI
SDSSILQRGGSWQQPPPPVRTYTKVYKLGSVGRSIDVTRCKNYDELRRELARMFGLEGQL
EDPHRSSWQLVFVDNENDVLLVGDDPWEEFVSCVRCIRILSPSEVLQMSQEGTLLNSLPL
QQQAGSSSDGGIVWRDHCDQNSTNPSVGSFEY
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Identical sequences PITA_000033561-RA

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