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Domain assignment for PITA_000038031-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000038031-RA
Domain Number 1 Region: 367-469
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.92e-27
Family B3 DNA binding domain 0.0000171
Further Details:      
 
Domain Number 2 Region: 224-280
Classification Level Classification E-value
Superfamily DNA-binding domain 1.44e-16
Family GCC-box binding domain 0.00065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PITA_000038031-RA
Sequence length 651
Comment protein AED:0.05 eAED:0.06 QI:0|0|0|0.5|1|1|2|0|651
Sequence
MNEYKIRKLRSAEQGTGVAPTTPNLSERVDRNRGVTSNASGGPAWINPVLQVGSVCYDGL
HGGAKKSVAPTTLTKSEMDCPSVVRSLGYCPMDDEISSINCSKKNTSPSTPASDEVEEPT
MKEAMEGDSSTEYNQDNEVSSAVTEEFTPSIKCFSENGRQLELEEGQFKDWVLARSKGKN
VQGLQSLGGGINVVPEPAGESHGFEVMRRYSLMSLQQTGKLQSSQYKGVLTQPNGRWGAQ
IYEKHERVWLGTFNKEEDAAIAYDRGALKFRGRDAMTNFSSARGGNPEARFMREHTKEQI
VDMLRKHSYDKEFEHHSKRIMMTAARPVSTTNNEELGSKGSCKRETETKSTDDGNGNSAM
AGLLRQHLFDKVVTPSDVGKLNRLVIPKLHAQKYFPLVIDSSETESLLNFEDTTGKIWRF
RYSYWKSSQSYVLTKGWSRFVKDKKLNVGDFVSFHRGSPEPRQLYISWRHRASVRPQLGL
GPQSGQSKAEFVHQGSLSSNSFNSGTQVTVGNVQWLPNTWPGFSNYAAYTQFNSNYILPL
VNKVGNFDRLCSHIPETSLKGDFSFRFSESHTRQTDQDRFRDINTDELPTIGLYLNLHNS
LNSGDGSTNIKPLHQPSAAQEGEAPEHKATSSLDPASKKGVRLFGVSLTES
Download sequence
Identical sequences PITA_000038031-RA

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