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Domain assignment for PITA_000040067-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000040067-RA
Domain Number 1 Region: 336-443
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.19e-30
Family B3 DNA binding domain 0.00000982
Further Details:      
 
Domain Number 2 Region: 186-242
Classification Level Classification E-value
Superfamily DNA-binding domain 6.21e-18
Family GCC-box binding domain 0.00067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PITA_000040067-RA
Sequence length 648
Comment protein AED:0.00 eAED:0.00 QI:0|1|1|1|1|1|2|0|648
Sequence
MTARTVASVALDGCKGQAPKRSSATANLWQSEIDSPDVELSLACCPPDVEMGSTICSEKN
ASASNPANHDLRRQVQCAGDEDREQTTNEAMKGDYSTEDKQDDEVASATTEEFSSCFTGV
SENATHLKQEGAVLKDWASTISMGRNHGGLERKGSGTSGMSGSGAESEDLRRYFVSMEQA
GKLPSSQYKGVVPQPNGRWGAQIYEKHQRVWLGTFNKEEDAARAYDRAALKFRGRDAMTN
FSLVGEADPEARFMREHTKEEIVEMLRKHTYAEEFHHHSKRIKFTVSRSATTNNVGASGA
EGFSLRANDVCHESQVAVHEHANVASAADVPACVPREHLFDKAVTPSDVGKLNRLVIPKQ
HAEKYFPLDVNSSEKGLILNFEDNMGNVWRFRYSYWNSSQSYVLTKGWSRFVKDKKLEAG
DVVSFHRGSAQSHQLYISWRRRPSGQPRLGVGPQSQQTNGIVVYPVNGASSLSPFNSGTQ
AAVHYNSQWTPILWPNFSNPHGFSDFNSNSMAPLVHKVGHVNSLWSQSPVTTPNGSLPFH
ISSPPAAKQTEQLSIYDIRPDGLPTMDLYLNFHNSLNSRNGSTNMKPLHPFVRPAWPSTA
PDLETSELKAASSLDPATTKGVRLFGVTLAEPQRLSAQHRGQLNLLIP
Download sequence
Identical sequences PITA_000040067-RA

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