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Domain assignment for PITA_000055255-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000055255-RA
Domain Number 1 Region: 80-164
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.02e-17
Family B3 DNA binding domain 0.0049
Further Details:      
 
Weak hits

Sequence:  PITA_000055255-RA
Domain Number - Region: 166-237
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0502
Family Pectate lyase-like 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PITA_000055255-RA
Sequence length 364
Comment protein AED:0.13 eAED:0.13 QI:0|0.5|0.2|0.8|0|0.2|5|0|364
Sequence
MGTENCSIPFVRGLEICLSCILLSMGDGKCCRSCFEKCLRTHYNKHGSSFFKVMAGEFSS
ILVNKMNIYSTLQCNSTQLFCKNIIEVPSDWFKRSQIKGLTYATLEGPCGHLWQTKVHFS
DKLTFFTEGWEKFVSDHWIQPEDIVVFRHVDDAHFLVQIFDVSGYERKNTVTVKNCESHN
LNKLGIYGTGAATFRQTVKGNPFKDASGDVNNVPRRITRSIGLKVAITGNRAEACINNGR
RLSTVKQEFPAHPKINVKQELGLPKSNWNFSENKVGSSAKDPIILDSEEEFDCQASSSYS
HDEDSDEVSYHFSSEVLQGKVHPVEDKTAHSVKKGKPKFTRVMKKSAVTHSFWLGLLHLL
HNMR
Download sequence
Identical sequences PITA_000055255-RA

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