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Domain assignment for PITA_000064382-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000064382-RA
Domain Number 1 Region: 389-502
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.62e-28
Family B3 DNA binding domain 0.0011
Further Details:      
 
Weak hits

Sequence:  PITA_000064382-RA
Domain Number - Region: 266-295
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00152
Family iota-carrageenase 0.06
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PITA_000064382-RA
Sequence length 666
Comment protein AED:0.51 eAED:0.54 QI:0|0|0|0.5|1|1|2|0|666
Sequence
MFPPKDRKTVAHVLSKVDSLLLTHANEERSVKFDEDISHAPVDGLVTKFPSPLIDEYVDE
TSDQHSDDDESLPVNPVRPPVVEHRDHTSARSLEDSRPPSTQKLCSMSDILDDPASIPLF
EEDSQALLAMEPSIPMHAYMMHGSDQPAEAPFGPDQPQTAGAPSHGSQPSDDDSINLSAL
QVCIKCNILKLENQIPLFVLQHVFNMGKDVLAEAHDPDFSYVLKKTYTVLSPFYAAERVS
VDRWRLTRSLAAASNTDNTTVPSNGHLLYVTGYGADPTGATNNTKAILAVINDAFNVATR
WEVYYYPQGHVEHAATVPDFVGNLRMSPSILCRVVSVKFLADTETDEVYARMRLVPISDD
EQNSSVEDSEAESRPLSPAINSQTESANNNHPPASFAKALTQSDANNGGGFSVPRYCAET
IFPRLDSSSNPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFINQKKLVAGDAI
VFLRSVTGELCVGVRRSTRSTTECHSHSNFHSHGSSVWHLPVSGISGITASPAPPHRASI
WEVKATDYFSGIATANSNGATGFSRNRGRVSAKSVIEEEIYARRDIDRSLVCGVDYYLRV
RLRYFKKSKDYLSLKEDSVDFEFIYFRYREPGTPRWNEHVMEEMEQIADIFTKTFKSRSF
DSCEIG
Download sequence
Identical sequences PITA_000064382-RA

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