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Domain assignment for gi|522816323|ref|YP_008184552.1| from Alteromonas macleodii str. 'Ionian Sea UM4b'

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|522816323|ref|YP_008184552.1|
Domain Number 1 Region: 7-199,243-381
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 3.22e-80
Family TK-like PP module 0.02
Further Details:      
 
Domain Number 2 Region: 316-502
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 7.74e-56
Family TK-like Pyr module 0.022
Further Details:      
 
Domain Number 3 Region: 492-624
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 7.59e-28
Family Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|522816323|ref|YP_008184552.1|
Sequence length 625
Comment 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str. 'Ionian Sea UM4b']
Sequence
MSLDLQHYPTLALAQTPDKLRQLPQDKLRELADELREYLLNSVSQTSGHFASGLGTVELT
VALHYVYNTPFDRLLWDVGHQAYPHKILTGRAERMSTIRQKNGLHPFPWPPESEYDTFAV
GHSSTSISAALGMAVAAEKEGKDRKVVSVIGDGAMTAGMAFEALNHAGDIKKDMVVVLND
NEMSISENVGALNSHLARLLTGNFFNSIRDGGKKLLSNVPPIKEFASRAEEHLKGMVVPG
TIFEELGFNYIGPIDGHDVNAVVDTLRNMRNFDGPQLLHVVTKKGKGYAVAEEDPIKFHA
VPKFNPADNALPKSKPSAPTYSAIFGQWLCDMAAQDPKLMAVTPAMREGSGMVEFSQRFP
EQYFDVAIAEQHAVTFGAGLAKDGMNAVVAIYSSFLQRAYDQLIHDVAIQDLPVLFAIDR
AGIVGADGPTHQGAFDIAFLRCIPNMVVMAPSDENECRQMLYTGHKLQKPAAVRYPRGAG
MGVTPDEAMTALEIGKSRTCRETAKDKSESVAILNFGCLLPYALEAAVAIDATVIDMRFI
KPLDGDAVLKAANEHSALITLEDGCIMGGAGSAVLEHLQQNGVLKAVKMLGLPDSFILQG
TQQEMYKEHGLDAEGIIAAAKSLIG
Download sequence
Identical sequences B4RVY8 S5C464
gi|410862283|ref|YP_006977517.1| 314275.MADE_01425 gi|522816323|ref|YP_008184552.1| gi|522614886|ref|YP_008180576.1| gi|522570123|ref|YP_008172552.1| WP_012518937.1.21115 WP_012518937.1.24997 WP_012518937.1.30323 WP_012518937.1.35093 WP_012518937.1.36926 WP_012518937.1.68468 WP_012518937.1.96561 gi|522668505|ref|YP_008196967.1| gi|332141879|ref|YP_004427617.1| gi|522590577|ref|YP_008176654.1|

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