SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OMERI01G02450.1 from Oryza meridionalis 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OMERI01G02450.1
Domain Number 1 Region: 177-289
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.09e-29
Family B3 DNA binding domain 0.0000118
Further Details:      
 
Domain Number 2 Region: 67-121
Classification Level Classification E-value
Superfamily DNA-binding domain 5.62e-16
Family GCC-box binding domain 0.00097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) OMERI01G02450.1
Sequence length 319
Comment pep:novel chromosome:ALNW00000000:1:1934993:1935952:1 gene:OMERI01G02450 transcript:OMERI01G02450.1 description:""
Sequence
MEQEAAMVVFSCNSGSGGSSSTTDSKQEEEEEEEEELAAMEEDELIHVVQAAELRLPSST
TATRPSSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRFRGRDAVT
NRAPAAEGASAGELAFLAAHSKAEVVDMLRKHTYDDELQQGLRRGSRAQPTPRWAREPLF
EKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYSY
WNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRSAAAWGTEKHLLIDCKKMERNNLATVDD
DARVVVKLFGVDIAGDKTR
Download sequence
Identical sequences A0A0E0BWW5
OMERI01G02450.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]