SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OMERI01G02460.1 from Oryza meridionalis 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OMERI01G02460.1
Domain Number 1 Region: 179-291
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.58e-30
Family B3 DNA binding domain 0.0000133
Further Details:      
 
Domain Number 2 Region: 67-123
Classification Level Classification E-value
Superfamily DNA-binding domain 1.63e-17
Family GCC-box binding domain 0.00077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) OMERI01G02460.1
Sequence length 365
Comment pep:novel chromosome:ALNW00000000:1:1963147:1964244:1 gene:OMERI01G02460 transcript:OMERI01G02460.1 description:""
Sequence
MGVVSFSSTSSGASTATTESGGAVRMSPEPVVAVAAAAQQLPVVKGVDSADEVVTSRPAA
AAAQQSSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRYRGRDAAT
NFPGAAASAAELAFLAAHSKAEIVDMLRKHTYADELRQGLRRGRGMGARAQPTPSWAREP
LFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVW
RFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDKLLFIDCKKNNAAAAT
TTCAGDERPTTSGAEPRVVRLFGVDIAGGDCRKRERAVEMGQEAFLLKRQCVVHQRTPAL
GALLL
Download sequence
Identical sequences A0A0E0BWW7
OMERI01G02460.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]