SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OMERI01G24380.1 from Oryza meridionalis 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OMERI01G24380.1
Domain Number 1 Region: 214-309
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.88e-30
Family B3 DNA binding domain 0.0000154
Further Details:      
 
Domain Number 2 Region: 79-135
Classification Level Classification E-value
Superfamily DNA-binding domain 4.25e-16
Family GCC-box binding domain 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OMERI01G24380.1
Sequence length 395
Comment pep:novel chromosome:ALNW00000000:1:26470972:26472159:-1 gene:OMERI01G24380 transcript:OMERI01G24380.1 description:""
Sequence
MDSSSCLVDDTNSGGSSTDKLRALAAAAAETAPLERMGSGASAVVDVAEPGAEADSGSGG
RLCGGGAGAGGAGGKLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDV
AAQRFRGRDAVTNFRPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRAFA
ASTPSAATTTTASLSNGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEK
HFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGD
VVGFYRSAASAGDDGKLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTVPAPA
PAEQMAGCKRARDLAATTPPQAAAFKKQCIELALV
Download sequence
Identical sequences A0A0E0C6G7
OMERI01G24380.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]