SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OMERI03G23090.1 from Oryza meridionalis 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OMERI03G23090.1
Domain Number 1 Region: 23-121
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.09e-24
Family B3 DNA binding domain 0.0037
Further Details:      
 
Domain Number 2 Region: 249-321
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000000000235
Family B3 DNA binding domain 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OMERI03G23090.1
Sequence length 328
Comment pep:novel chromosome:ALNW00000000:3:24491265:24494607:1 gene:OMERI03G23090 transcript:OMERI03G23090.1 description:""
Sequence
MAGGGSHMKKSCACCKRYLEHLGGKMSCFLIRMTTDYMHSMIIPDRFVNHFGGKIPGTIK
LESPNGILYVVEVTECMNKMVLQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSDG
CERVFSCAGIKTSSCVQDKTVDPVDTSGRSSDDTAQPSRSERFARCQRDTSNDHRNTASL
TAVSSSSEESENVSLKSNRNGVSDESQESEDSEGPAGPPYILSWKSKSRLSSLQKKIIKD
KELGARYAAAVHLPDRRQTMVLQRMGQRWDTVMQTKSGRCTTRRFLINGWSRFVRDNRLG
VGDICLLELKKHDSKLTMTVHTIFSQQS
Download sequence
Identical sequences OMERI03G23090.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]