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Domain assignment for OMERI04G24270.4 from Oryza meridionalis 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  OMERI04G24270.4
Domain Number 1 Region: 142-286
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.22e-47
Family B3 DNA binding domain 0.0065
Further Details:      
 
Domain Number 2 Region: 1042-1186
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.22e-47
Family B3 DNA binding domain 0.0065
Further Details:      
 
Domain Number 3 Region: 1636-1715
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000373
Family PB1 domain 0.038
Further Details:      
 
Domain Number 4 Region: 736-811
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000589
Family PB1 domain 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) OMERI04G24270.4
Sequence length 1739
Comment pep:novel chromosome:ALNW00000000:4:29028165:29044057:-1 gene:OMERI04G24270 transcript:OMERI04G24270.4 description:""
Sequence
MVAISELGLRVCASLVWSEEEEMSSSSAASIGPPQPPPPPAPPEEEKKCLNSELWHACAG
PLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVET
DEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPRRAAE
RVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDS
VLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPR
ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSS
YWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWYSGVASLHDDSNA
LMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHDQYQAVVAAAAASQSGGYLK
QQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDAQNIQTMLSPSAIQQQLQQL
QQMQQVQNDQKQKIQPDQSYQVPTSAVLPSPTSLPSHLREKFGFSDPNANSSSFITSSSS
DNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQAWKQKFMGSQSVSFGGSVLHNSPTSK
DGSVENKIGRDVQNQSLFSPQVDSSSLLYNMVPNLTSNVSDGNLSTIPSGSTYLQNAMYG
CLDDSSGLLQNTGENDPATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQL
DDPDRSGWQLVFVDRENDVLLLGDDPWELRVCASLVWSEEEEMSSSSAASIGPPQPPPPP
APPEEGGWLGLFPPLRFAVHFVSLLVWLMTRSASAAAAAAAEKKCLNSELWHACAGPLVC
LPTVGTRVVYFPQGHSEQVRLSSPPQPSRGRACFASLSLSLLVSLVSDAGELAYVKVAAS
TNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCS
AELLMVWRSEIFYAQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPRRAAE
RVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDS
VLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPR
ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSS
YWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWYSGVASLHDDSNA
LMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHDQYQAVVAAAAASQSGGYLK
QQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDAQNIQTMLSPSAIQQQLQQL
QQMQQVQNDQKQKIQPDQSYQVPTSAVLPSPTSLPSHLREKFGFSDPNANSSSFITSSSS
DNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQAWKQKFMGSQSVSFGGSVLHNSPTSK
DGSVENKIGRDVQNQSLFSPQVDSSSLLYNMVPNLTSNVSDGNLSTIPSGSTYLQNAMYG
CLDDSSGLLQNTGENDPATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQL
DDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRYLS
Download sequence
Identical sequences A0A0E0DJY7
OMERI04G24270.4

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