SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OMERI04G24670.1 from Oryza meridionalis 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OMERI04G24670.1
Domain Number 1 Region: 436-490
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000129
Family B3 DNA binding domain 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OMERI04G24670.1
Sequence length 538
Comment pep:novel chromosome:ALNW00000000:4:29322768:29329356:-1 gene:OMERI04G24670 transcript:OMERI04G24670.1 description:""
Sequence
MEWQLQGELRDIYFHHNPMVRMTAAIEAAPMVMKGDRHKPPSAAPTPTPDAGRRVGAETL
TAAGHHGIGTTVSGIRRQGCEGEASSLLGEDSFLGICSPTKLPQTRERERVGGAPTPSSP
RPRPLPLLVHRGTLCASCTRMADTRGSTSSGGGDDRGREGHDDFAGGGQYNRYHRILEAM
PSPLVRRENVVHHQYPTGLIHHPSSTMPVAPCSYVPRYTMVPTSAMLPLQHHHRQLQISQ
ENFQDRVPSNNVAAPHLPSNFQDLRPMCNGPPFMSFGQTASNRNVLYQNLTPYSFNAWAS
NNMPRNPVYTSYHPTTIEDPHATPFHINNHDTDQGFFTVSTSFRVDQSFVHAPSPFPPVS
SSSRSFSSAQISNGPTHAKKAKKSDIKDQPIVLRISDTESEKNDELDQTPASEPSSMSHN
SENLTIRFNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGMMLKMDDFK
LETTWNFKYSLESEKLVVRGEKAIKPNVIMPIVDCSCKNELNNSEECGFAISLLTKKT
Download sequence
Identical sequences OMERI04G24670.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]