SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OMERI06G20210.1 from Oryza meridionalis 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OMERI06G20210.1
Domain Number 1 Region: 139-243
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.08e-19
Family B3 DNA binding domain 0.005
Further Details:      
 
Domain Number 2 Region: 315-408
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000000216
Family B3 DNA binding domain 0.0076
Further Details:      
 
Domain Number 3 Region: 12-124
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000167
Family B3 DNA binding domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) OMERI06G20210.1
Sequence length 410
Comment pep:novel chromosome:ALNW00000000:6:25550844:25554430:-1 gene:OMERI06G20210 transcript:OMERI06G20210.1 description:""
Sequence
MPLSAGSLRRRPKFAAPLLSPACLRRLSVPGEFAARLDDDDAAGVGEEERGRRAAAVLVV
GPLGKVWRVELRRSPAGDGDGEAWLGGGWPELAAAHGLGEGWGVVLRLERRGVASLRVFD
PGFCLARFCTPHAGMRTKDRPRFIKLLQQEHLEKMKIPEKFVQQHLTETYTNNHQNAIIV
CPLGKFWRVELQQDQPDVLLRDGWAPFLAAHDLSEGNILLFRYEGNMVFTVEVFLQNGCL
KEYKTAALYLTDGTKGPSNAPQQSAAKVGVSPVKRKRTRRIEGTCLEGPNRKSRASPISV
KVEPQKKHVSIVSQNSFTKEMTAYSIHSLLSVRGTFCSQIGLLEACAITLKTSMKKKGSW
RVAFKTANTYGYINGPGWRKFCLENEVKEGDRLTFNSIETTIWHVVIVHC
Download sequence
Identical sequences OMERI06G20210.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]