SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|338740219|ref|YP_004677181.1| from Hyphomicrobium sp. MC1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|338740219|ref|YP_004677181.1|
Domain Number 1 Region: 47-264
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 8.09e-52
Family Phosphate binding protein-like 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|338740219|ref|YP_004677181.1|
Sequence length 324
Comment sulfonate transport system substrate-binding protein [Hyphomicrobium sp. MC1]
Sequence
MTFLRRAKAWTAFGFFLILATAAHAADKVSEIKIDWATYNPVSLAIKDNGILEKEFEKDG
ITVRWVQSLGSNKALEFLNASSLDFGSTAGAAALIGRINGNPIKSIYVYSRPEWTALVTR
PDTGINTVADLKGKRVAVTRGTDPHIFLIRALQGAGLTEKDVTVVVLQHGDGKAALIRGD
VDAWAGLDPLMASAEIENGAKLFYRNRAANTWGILNVREAFAKEHPDLVKRVLAAYEKAR
EWSLAHPAELQKLLVTATKLPDAVIAQQLGERTDLTFSKIGPPQKETIVAAGLALQKAGV
IKPDVDVVAATDALIDSKYSTASN
Download sequence
Identical sequences F8JEL8
WP_013949010.1.98067 gi|338740219|ref|YP_004677181.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]