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Domain assignment for ENSSSCP00000004397 from Sus scrofa 69_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000004397
Domain Number 1 Region: 76-219
Classification Level Classification E-value
Superfamily ENTH/VHS domain 3.53e-33
Family RPR domain (SMART 00582 ) 0.0039
Further Details:      
 
Domain Number 2 Region: 498-627
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.63e-18
Family Canonical RBD 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000004397   Gene: ENSSSCG00000004070   Transcript: ENSSSCT00000004499
Sequence length 1347
Comment pep:known_by_projection chromosome:Sscrofa10.2:1:14015976:14166874:-1 gene:ENSSSCG00000004070 transcript:ENSSSCT00000004499 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPQPLLPALPPPSSRCAAGSCGPSGGEVKQEPVGGRGKRGWRDAPSSRPRSRPRLALPTQ
CSASRLSRFPGPGLCTDNMEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKH
VVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRC
PGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPV
TPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSIL
QALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKE
IPTSQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEH
SASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEESFEQEAKKVAVRSRSRT
HSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKK
GLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHR
QDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLE
GFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPPPVEKETVVTTQAEVFPPPVAMLQ
IPVAPAVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVV
PPPTIPPVVPTSLVQPPLSMTPETVKDVGFGSLVLPGGSVASSLATSTLPAGSVFNPPTK
QAEPEEKVPHLLDHQISSGENTRSVIPNDISSNSAILGGQPPNVTSNSGILGVQRPNVSS
NNEILGVRPSNVSSGSGIIGPQPPTILNNSGILGIQPPSVSSSSGLLGVLPPNIPNSSGL
IGVQPPGVPNPGLLGTQPPAGPQNLPPLNLSNQRMPAMPILDIRPGLIPQTPGPRFPLIQ
PGIPPQRGLPPPSVLDAALHPPPRGPFPPGDIFSPPERPFLVPGRQSVDNVSNPEKRIPL
GNDNIQQEGDRDYRFPPMETRETISRPPPVDVRDVVGRPVDPREGPGRPPLDGREHFGRP
PVDIRENLVRPGIDHLGRRDHFGFTPEKPWGHRDFDEREHRVLPVYAGPKGLHEERGRFR
SGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQ
NTWVPPPHARVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPAQSDPELYEKLTSSS
EISKEKSDTVADIESEPVVESTETEGT
Download sequence
Identical sequences ENSSSCP00000004397 ENSSSCP00000004397

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