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Domain assignment for ENSSSCP00000030127 from Sus scrofa 69_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000030127
Domain Number 1 Region: 365-544
Classification Level Classification E-value
Superfamily NTF2-like 1.75e-61
Family NTF2-like 0.00000131
Further Details:      
 
Domain Number 2 Region: 96-185
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.59e-35
Family Non-canonical RBD domain 0.000077
Further Details:      
 
Domain Number 3 Region: 195-349
Classification Level Classification E-value
Superfamily L domain-like 6.46e-31
Family mRNA export factor tap 0.00000356
Further Details:      
 
Domain Number 4 Region: 543-609
Classification Level Classification E-value
Superfamily UBA-like 6.63e-24
Family TAP-C domain-like 0.00019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000030127   Gene: ENSSSCG00000028825   Transcript: ENSSSCT00000032757
Sequence length 613
Comment pep:putative chromosome:Sscrofa10.2:X:97566270:97575806:-1 gene:ENSSSCG00000028825 transcript:ENSSSCT00000032757 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
XYDDAGSSSQERSEGWSSSPHSLSKRSPRYEHGGYEPQPSGLQEEDGNVMMMDVQEDPKG
RDSPYTARGDKRRVRWHSEGHIHITVWRDRKLLEREKGKNTQDRTLSSWFKVTIPHGRKY
DKTWLMDSIQSRCSVPFTPVDFHCVKNQARFFVQDASTASALKDVSYEICDKDNRKIPII
VNPSDVVPYSVHDKLKPGEMEQLKLTLHKRYNISQQALDLQRLRYDPDLTGHDIDIILNR
RNCMSATLQVIKKNFPELLSLNLSSNKLYRLDGLSDIIQMVPMVKILNLSKNELKSAWEL
SKMKGLKLEELWLQGNPLCSTFPDQSTYVSAIRECFPKLLRLDGQELLSPSIVDNDAPYV
LKPCKESYKGSNELKSLILQFLRQYYLIHDYGDRRRLLGAYHNEACFSLTIPFHPEDPDP
SSLYEYLEENRNMKKLKDPHLRVQLLKHTKGDIVTSLCVLPKTQHDLSSFVVDMWFQTET
MLCFSINGVFKEVEGQSRGCVRAFTRTFITTPATSSSLCIVNDELFVREASPSETQSAAF
FIPVPTASASSVCTLSQELQEMVQAFSTQSGMKLEWSQKCLQDNEWNYTRAGQVFSILKT
EGKIPEEAFKEIP
Download sequence
Identical sequences ENSSSCP00000030127 ENSSSCP00000027022

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