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Domain assignment for ENSSSCP00000001910 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000001910
Domain Number 1 Region: 232-487
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 1.23e-83
Family Neurotransmitter-gated ion-channel transmembrane pore 0.00000155
Further Details:      
 
Domain Number 2 Region: 26-232
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 2.35e-65
Family Nicotinic receptor ligand binding domain-like 0.00061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000001910   Gene: ENSSSCG00000001753   Transcript: ENSSSCT00000001959
Sequence length 495
Comment pep:known_by_projection chromosome:Sscrofa10.2:7:52809705:52829010:-1 gene:ENSSSCG00000001753 transcript:ENSSSCT00000001959 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRSVLPLLLFSLVALCWRGDCRMANAEEKLMDDLLNKTRYNNLIRPATSSSQVISIQLQL
SLAQLISVNEREQIMTTNVWLKQEWTDYRLAWNSSRYEGVNILRIPAKRVWLPDIVLYNN
ADGTYEVSLYTNVLVRSNGSILWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTE
IDMVLKSPKASMDDFTPSGEWDIVALPGRRTVNPQDPSYVDVTYDFIIKRKPLFYTINLI
IPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLM
FTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKRPDGSPSRAPRP
SQARLIKSEAAATASALGPASSSNLYGNSMYFVNPASAAPKSPAGSDVAGIPRDFRLRSS
GRFHQDVQEALEGVSFIAQHMKSDDQDQSVIEDWKYVAMVVDRLFLWVFVVVCVLGTVGL
FLPPLFQTHTPSEGS
Download sequence
Identical sequences ENSSSCP00000001910 ENSSSCP00000001910

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